| Motif | ZN726.H14RSNP.0.PSGI.D |
| Gene (human) | ZNF726 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN726.H14RSNP.0.PSGI.D |
| Gene (human) | ZNF726 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 21 |
| Consensus | dnRvhvTRGRKATTGCTTRnb |
| GC content | 44.87% |
| Information content (bits; total / per base) | 20.016 / 0.953 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX + SMiLe-Seq |
| Aligned words | 2072 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 2 (2) | 0.931 | 0.961 | 0.905 | 0.93 | 0.926 | 0.964 | 39.502 | 57.18 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| GFPIVT, 2 experiments | median | 1.0 | 1.0 | 0.998 | 0.998 | 0.953 | 0.957 |
| best | 1.0 | 1.0 | 0.999 | 0.999 | 0.996 | 0.996 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| GFPIVT, 2 experiments | median | 443.835 | 0.913 | 0.927 | 0.89 |
| best | 672.108 | 0.933 | 0.959 | 0.93 | |
| SMiLE-Seq benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 1 experiments | median | 0.657 | 0.625 | 0.584 | 0.574 | 0.543 | 0.545 |
| best | 0.657 | 0.625 | 0.584 | 0.574 | 0.543 | 0.545 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.226 |
| HGNC | HGNC:32462 |
| MGI | |
| EntrezGene (human) | GeneID:730087 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN726_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | A6NNF4 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT |
| Genomic HT-SELEX | 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT |
| SMiLE-Seq | 1 |
| PBM | 0 |
| PCM | ZN726.H14RSNP.0.PSGI.D.pcm |
| PWM | ZN726.H14RSNP.0.PSGI.D.pwm |
| PFM | ZN726.H14RSNP.0.PSGI.D.pfm |
| Threshold to P-value map | ZN726.H14RSNP.0.PSGI.D.thr |
| Motif in other formats | |
| JASPAR format | ZN726.H14RSNP.0.PSGI.D_jaspar_format.txt |
| MEME format | ZN726.H14RSNP.0.PSGI.D_meme_format.meme |
| Transfac format | ZN726.H14RSNP.0.PSGI.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 944.5 | 296.5 | 372.5 | 458.5 |
| 02 | 385.25 | 759.25 | 427.25 | 500.25 |
| 03 | 245.0 | 111.0 | 1493.0 | 223.0 |
| 04 | 356.0 | 923.0 | 506.0 | 287.0 |
| 05 | 681.0 | 950.0 | 177.0 | 264.0 |
| 06 | 338.0 | 742.0 | 731.0 | 261.0 |
| 07 | 107.0 | 70.0 | 86.0 | 1809.0 |
| 08 | 1421.0 | 32.0 | 505.0 | 114.0 |
| 09 | 23.0 | 19.0 | 1983.0 | 47.0 |
| 10 | 822.0 | 10.0 | 1138.0 | 102.0 |
| 11 | 4.0 | 90.0 | 1350.0 | 628.0 |
| 12 | 1966.0 | 25.0 | 81.0 | 0.0 |
| 13 | 2.0 | 0.0 | 0.0 | 2070.0 |
| 14 | 0.0 | 0.0 | 0.0 | 2072.0 |
| 15 | 102.0 | 1.0 | 1714.0 | 255.0 |
| 16 | 3.0 | 2069.0 | 0.0 | 0.0 |
| 17 | 2.0 | 8.0 | 4.0 | 2058.0 |
| 18 | 32.0 | 30.0 | 98.0 | 1912.0 |
| 19 | 1045.0 | 44.0 | 889.0 | 94.0 |
| 20 | 344.25 | 575.25 | 379.25 | 773.25 |
| 21 | 269.0 | 360.0 | 474.0 | 969.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.456 | 0.143 | 0.18 | 0.221 |
| 02 | 0.186 | 0.366 | 0.206 | 0.241 |
| 03 | 0.118 | 0.054 | 0.721 | 0.108 |
| 04 | 0.172 | 0.445 | 0.244 | 0.139 |
| 05 | 0.329 | 0.458 | 0.085 | 0.127 |
| 06 | 0.163 | 0.358 | 0.353 | 0.126 |
| 07 | 0.052 | 0.034 | 0.042 | 0.873 |
| 08 | 0.686 | 0.015 | 0.244 | 0.055 |
| 09 | 0.011 | 0.009 | 0.957 | 0.023 |
| 10 | 0.397 | 0.005 | 0.549 | 0.049 |
| 11 | 0.002 | 0.043 | 0.652 | 0.303 |
| 12 | 0.949 | 0.012 | 0.039 | 0.0 |
| 13 | 0.001 | 0.0 | 0.0 | 0.999 |
| 14 | 0.0 | 0.0 | 0.0 | 1.0 |
| 15 | 0.049 | 0.0 | 0.827 | 0.123 |
| 16 | 0.001 | 0.999 | 0.0 | 0.0 |
| 17 | 0.001 | 0.004 | 0.002 | 0.993 |
| 18 | 0.015 | 0.014 | 0.047 | 0.923 |
| 19 | 0.504 | 0.021 | 0.429 | 0.045 |
| 20 | 0.166 | 0.278 | 0.183 | 0.373 |
| 21 | 0.13 | 0.174 | 0.229 | 0.468 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.599 | -0.555 | -0.328 | -0.122 |
| 02 | -0.295 | 0.381 | -0.192 | -0.035 |
| 03 | -0.745 | -1.527 | 1.056 | -0.838 |
| 04 | -0.373 | 0.576 | -0.023 | -0.588 |
| 05 | 0.273 | 0.605 | -1.067 | -0.67 |
| 06 | -0.425 | 0.358 | 0.343 | -0.682 |
| 07 | -1.563 | -1.978 | -1.777 | 1.248 |
| 08 | 1.007 | -2.73 | -0.025 | -1.501 |
| 09 | -3.038 | -3.213 | 1.34 | -2.364 |
| 10 | 0.46 | -3.776 | 0.785 | -1.61 |
| 11 | -4.477 | -1.733 | 0.956 | 0.192 |
| 12 | 1.331 | -2.961 | -1.836 | -5.607 |
| 13 | -4.89 | -5.607 | -5.607 | 1.383 |
| 14 | -5.607 | -5.607 | -5.607 | 1.384 |
| 15 | -1.61 | -5.186 | 1.194 | -0.705 |
| 16 | -4.663 | 1.382 | -5.607 | -5.607 |
| 17 | -4.89 | -3.96 | -4.477 | 1.377 |
| 18 | -2.73 | -2.791 | -1.649 | 1.303 |
| 19 | 0.7 | -2.427 | 0.539 | -1.69 |
| 20 | -0.407 | 0.104 | -0.31 | 0.399 |
| 21 | -0.652 | -0.362 | -0.088 | 0.625 |
| P-value | Threshold |
|---|---|
| 0.001 | -0.90589 |
| 0.0005 | 0.74296 |
| 0.0001 | 4.19456 |