| Motif | ZN669.H14INVIVO.1.P.C |
| Gene (human) | ZNF669 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | C |
| Motif | ZN669.H14INVIVO.1.P.C |
| Gene (human) | ZNF669 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | C |
| Motif length | 12 |
| Consensus | YGGTCATCGSCC |
| GC content | 67.94% |
| Information content (bits; total / per base) | 17.063 / 1.422 |
| Data sources | ChIP-Seq |
| Aligned words | 223 |
| Previous names | ZN669.H12INVIVO.1.P.C |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (9) | 0.647 | 0.983 | 0.628 | 0.979 | 0.581 | 0.979 | 3.203 | 7.84 | 91.721 | 132.77 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF763-like {2.3.3.33} (TFClass) |
| TFClass ID | TFClass: 2.3.3.33.4 |
| HGNC | HGNC:25736 |
| MGI | |
| EntrezGene (human) | GeneID:79862 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN669_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q96BR6 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZN669.H14INVIVO.1.P.C.pcm |
| PWM | ZN669.H14INVIVO.1.P.C.pwm |
| PFM | ZN669.H14INVIVO.1.P.C.pfm |
| Threshold to P-value map | ZN669.H14INVIVO.1.P.C.thr |
| Motif in other formats | |
| JASPAR format | ZN669.H14INVIVO.1.P.C_jaspar_format.txt |
| MEME format | ZN669.H14INVIVO.1.P.C_meme_format.meme |
| Transfac format | ZN669.H14INVIVO.1.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 6.0 | 111.0 | 9.0 | 97.0 |
| 02 | 47.0 | 1.0 | 171.0 | 4.0 |
| 03 | 3.0 | 1.0 | 219.0 | 0.0 |
| 04 | 3.0 | 1.0 | 12.0 | 207.0 |
| 05 | 0.0 | 223.0 | 0.0 | 0.0 |
| 06 | 164.0 | 0.0 | 58.0 | 1.0 |
| 07 | 0.0 | 3.0 | 5.0 | 215.0 |
| 08 | 1.0 | 217.0 | 0.0 | 5.0 |
| 09 | 67.0 | 0.0 | 155.0 | 1.0 |
| 10 | 10.0 | 101.0 | 93.0 | 19.0 |
| 11 | 0.0 | 221.0 | 1.0 | 1.0 |
| 12 | 1.0 | 216.0 | 0.0 | 6.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.027 | 0.498 | 0.04 | 0.435 |
| 02 | 0.211 | 0.004 | 0.767 | 0.018 |
| 03 | 0.013 | 0.004 | 0.982 | 0.0 |
| 04 | 0.013 | 0.004 | 0.054 | 0.928 |
| 05 | 0.0 | 1.0 | 0.0 | 0.0 |
| 06 | 0.735 | 0.0 | 0.26 | 0.004 |
| 07 | 0.0 | 0.013 | 0.022 | 0.964 |
| 08 | 0.004 | 0.973 | 0.0 | 0.022 |
| 09 | 0.3 | 0.0 | 0.695 | 0.004 |
| 10 | 0.045 | 0.453 | 0.417 | 0.085 |
| 11 | 0.0 | 0.991 | 0.004 | 0.004 |
| 12 | 0.004 | 0.969 | 0.0 | 0.027 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.05 | 0.677 | -1.708 | 0.544 |
| 02 | -0.166 | -3.19 | 1.105 | -2.367 |
| 03 | -2.574 | -3.19 | 1.35 | -3.743 |
| 04 | -2.574 | -3.19 | -1.453 | 1.294 |
| 05 | -3.743 | 1.368 | -3.743 | -3.743 |
| 06 | 1.063 | -3.743 | 0.039 | -3.19 |
| 07 | -3.743 | -2.574 | -2.196 | 1.332 |
| 08 | -3.19 | 1.341 | -3.743 | -2.196 |
| 09 | 0.18 | -3.743 | 1.007 | -3.19 |
| 10 | -1.615 | 0.584 | 0.502 | -1.032 |
| 11 | -3.743 | 1.359 | -3.19 | -3.19 |
| 12 | -3.19 | 1.337 | -3.743 | -2.05 |
| P-value | Threshold |
|---|---|
| 0.001 | 1.98942 |
| 0.0005 | 3.339915 |
| 0.0001 | 5.99192 |