MotifZN384.H14RSNP.0.PSM.D
Gene (human)ZNF384
(GeneCards)
Gene synonyms (human)CAGH1, CIZ, NMP4, TNRC1
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length17
ConsensusnvdRRAAAAAAAMGYvn
GC content26.18%
Information content (bits; total / per base)18.001 / 1.059
Data sourcesChIP-Seq + HT-SELEX + Methyl-HT-SELEX
Aligned words325
Previous namesZN384.H12RSNP.0.PSM.D

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 3 (19) 0.944 0.967 0.873 0.928 0.969 0.988 5.994 6.357 394.155 457.237

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.953 0.916 0.932 0.895 0.839 0.823
best 0.956 0.922 0.952 0.911 0.917 0.881
Methyl HT-SELEX, 1 experiments median 0.95 0.909 0.952 0.911 0.917 0.881
best 0.95 0.909 0.952 0.911 0.917 0.881
Non-Methyl HT-SELEX, 1 experiments median 0.956 0.922 0.911 0.878 0.761 0.766
best 0.956 0.922 0.911 0.878 0.761 0.766
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF362-like {2.3.3.37} (TFClass)
TFClass IDTFClass: 2.3.3.37.2
HGNCHGNC:11955
MGI
EntrezGene (human)GeneID:171017
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN384_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TF68
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 3 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
Genomic HT-SELEX 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT
SMiLE-Seq 0
PBM 0
PCM
ACGT
01106.066.089.064.0
02148.039.0108.030.0
03140.041.094.050.0
04188.019.092.026.0
05250.05.051.019.0
06299.01.022.03.0
07325.00.00.00.0
08325.00.00.00.0
09325.00.00.00.0
10325.00.00.00.0
11325.00.00.00.0
12325.00.00.00.0
13184.074.067.00.0
1485.00.0240.00.0
1548.0114.08.0155.0
16146.2536.25122.2520.25
1799.088.070.068.0
PFM
ACGT
010.3260.2030.2740.197
020.4550.120.3320.092
030.4310.1260.2890.154
040.5780.0580.2830.08
050.7690.0150.1570.058
060.920.0030.0680.009
071.00.00.00.0
081.00.00.00.0
091.00.00.00.0
101.00.00.00.0
111.00.00.00.0
121.00.00.00.0
130.5660.2280.2060.0
140.2620.00.7380.0
150.1480.3510.0250.477
160.450.1120.3760.062
170.3050.2710.2150.209
PWM
ACGT
010.262-0.2040.09-0.234
020.592-0.7150.28-0.967
030.537-0.6670.143-0.475
040.829-1.3970.122-1.103
051.112-2.552-0.455-1.397
061.29-3.521-1.26-2.923
071.373-4.046-4.046-4.046
081.373-4.046-4.046-4.046
091.373-4.046-4.046-4.046
101.373-4.046-4.046-4.046
111.373-4.046-4.046-4.046
121.373-4.046-4.046-4.046
130.808-0.092-0.189-4.046
140.044-4.0461.071-4.046
15-0.5140.334-2.170.638
160.58-0.7860.403-1.338
170.1940.078-0.146-0.175
Standard thresholds
P-value Threshold
0.001 0.80301
0.0005 2.27166
0.0001 5.44061