| Motif | ZN341.H14CORE.0.P.B |
| Gene (human) | ZNF341 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | ZN341.H14CORE.0.P.B |
| Gene (human) | ZNF341 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 10 |
| Consensus | nRGAASAGCh |
| GC content | 60.21% |
| Information content (bits; total / per base) | 11.042 / 1.104 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| Previous names | ZN341.H12CORE.0.P.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 6 (38) | 0.822 | 0.858 | 0.718 | 0.775 | 0.787 | 0.819 | 2.505 | 2.744 | 119.377 | 220.252 |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 2.707 | 4.106 | 0.134 | 0.059 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Multiple dispersed zinc fingers {2.3.4} (TFClass) |
| TF subfamily | Unclassified {2.3.4.0} (TFClass) |
| TFClass ID | TFClass: 2.3.4.0.35 |
| HGNC | HGNC:15992 |
| MGI | |
| EntrezGene (human) | GeneID:84905 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN341_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9BYN7 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 6 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZN341.H14CORE.0.P.B.pcm |
| PWM | ZN341.H14CORE.0.P.B.pwm |
| PFM | ZN341.H14CORE.0.P.B.pfm |
| Threshold to P-value map | ZN341.H14CORE.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | ZN341.H14CORE.0.P.B_jaspar_format.txt |
| MEME format | ZN341.H14CORE.0.P.B_meme_format.meme |
| Transfac format | ZN341.H14CORE.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 208.0 | 165.0 | 341.0 | 286.0 |
| 02 | 208.0 | 8.0 | 749.0 | 35.0 |
| 03 | 41.0 | 56.0 | 862.0 | 41.0 |
| 04 | 867.0 | 75.0 | 55.0 | 3.0 |
| 05 | 916.0 | 16.0 | 61.0 | 7.0 |
| 06 | 15.0 | 546.0 | 407.0 | 32.0 |
| 07 | 919.0 | 10.0 | 56.0 | 15.0 |
| 08 | 2.0 | 11.0 | 982.0 | 5.0 |
| 09 | 28.0 | 950.0 | 17.0 | 5.0 |
| 10 | 176.0 | 535.0 | 119.0 | 170.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.208 | 0.165 | 0.341 | 0.286 |
| 02 | 0.208 | 0.008 | 0.749 | 0.035 |
| 03 | 0.041 | 0.056 | 0.862 | 0.041 |
| 04 | 0.867 | 0.075 | 0.055 | 0.003 |
| 05 | 0.916 | 0.016 | 0.061 | 0.007 |
| 06 | 0.015 | 0.546 | 0.407 | 0.032 |
| 07 | 0.919 | 0.01 | 0.056 | 0.015 |
| 08 | 0.002 | 0.011 | 0.982 | 0.005 |
| 09 | 0.028 | 0.95 | 0.017 | 0.005 |
| 10 | 0.176 | 0.535 | 0.119 | 0.17 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.183 | -0.412 | 0.309 | 0.134 |
| 02 | -0.183 | -3.253 | 1.093 | -1.925 |
| 03 | -1.774 | -1.473 | 1.233 | -1.774 |
| 04 | 1.239 | -1.188 | -1.49 | -3.975 |
| 05 | 1.294 | -2.653 | -1.39 | -3.362 |
| 06 | -2.711 | 0.777 | 0.485 | -2.01 |
| 07 | 1.297 | -3.066 | -1.473 | -2.711 |
| 08 | -4.213 | -2.985 | 1.363 | -3.622 |
| 09 | -2.136 | 1.33 | -2.598 | -3.622 |
| 10 | -0.348 | 0.757 | -0.735 | -0.382 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.439445 |
| 0.0005 | 5.406395 |
| 0.0001 | 7.225635 |