| Motif | ZN329.H14INVIVO.1.P.C |
| Gene (human) | ZNF329 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf329 |
| Gene synonyms (mouse) | Zfp329 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | C |
| Motif | ZN329.H14INVIVO.1.P.C |
| Gene (human) | ZNF329 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf329 |
| Gene synonyms (mouse) | Zfp329 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | C |
| Motif length | 12 |
| Consensus | SCTGGATCMARC |
| GC content | 60.14% |
| Information content (bits; total / per base) | 14.651 / 1.221 |
| Data sources | ChIP-Seq |
| Aligned words | 896 |
| Previous names | ZN329.H12INVIVO.1.P.C |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (5) | 0.803 | 0.837 | 0.806 | 0.839 | 0.77 | 0.813 | 4.498 | 4.804 | 412.745 | 442.319 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.148 |
| HGNC | HGNC:14209 |
| MGI | MGI:1921283 |
| EntrezGene (human) | GeneID:79673 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:67230 (SSTAR profile) |
| UniProt ID (human) | ZN329_HUMAN |
| UniProt ID (mouse) | ZN329_MOUSE |
| UniProt AC (human) | Q86UD4 (TFClass) |
| UniProt AC (mouse) | Q6GQR8 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZN329.H14INVIVO.1.P.C.pcm |
| PWM | ZN329.H14INVIVO.1.P.C.pwm |
| PFM | ZN329.H14INVIVO.1.P.C.pfm |
| Threshold to P-value map | ZN329.H14INVIVO.1.P.C.thr |
| Motif in other formats | |
| JASPAR format | ZN329.H14INVIVO.1.P.C_jaspar_format.txt |
| MEME format | ZN329.H14INVIVO.1.P.C_meme_format.meme |
| Transfac format | ZN329.H14INVIVO.1.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 36.0 | 684.0 | 115.0 | 61.0 |
| 02 | 25.0 | 863.0 | 2.0 | 6.0 |
| 03 | 7.0 | 85.0 | 6.0 | 798.0 |
| 04 | 77.0 | 4.0 | 698.0 | 117.0 |
| 05 | 21.0 | 17.0 | 839.0 | 19.0 |
| 06 | 834.0 | 11.0 | 16.0 | 35.0 |
| 07 | 38.0 | 19.0 | 74.0 | 765.0 |
| 08 | 41.0 | 766.0 | 40.0 | 49.0 |
| 09 | 279.0 | 536.0 | 24.0 | 57.0 |
| 10 | 746.0 | 57.0 | 49.0 | 44.0 |
| 11 | 167.0 | 59.0 | 635.0 | 35.0 |
| 12 | 13.0 | 857.0 | 10.0 | 16.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.04 | 0.763 | 0.128 | 0.068 |
| 02 | 0.028 | 0.963 | 0.002 | 0.007 |
| 03 | 0.008 | 0.095 | 0.007 | 0.891 |
| 04 | 0.086 | 0.004 | 0.779 | 0.131 |
| 05 | 0.023 | 0.019 | 0.936 | 0.021 |
| 06 | 0.931 | 0.012 | 0.018 | 0.039 |
| 07 | 0.042 | 0.021 | 0.083 | 0.854 |
| 08 | 0.046 | 0.855 | 0.045 | 0.055 |
| 09 | 0.311 | 0.598 | 0.027 | 0.064 |
| 10 | 0.833 | 0.064 | 0.055 | 0.049 |
| 11 | 0.186 | 0.066 | 0.709 | 0.039 |
| 12 | 0.015 | 0.956 | 0.011 | 0.018 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.79 | 1.111 | -0.66 | -1.281 |
| 02 | -2.135 | 1.343 | -4.111 | -3.378 |
| 03 | -3.256 | -0.957 | -3.378 | 1.265 |
| 04 | -1.054 | -3.679 | 1.131 | -0.643 |
| 05 | -2.297 | -2.491 | 1.315 | -2.389 |
| 06 | 1.309 | -2.878 | -2.546 | -1.816 |
| 07 | -1.738 | -2.389 | -1.092 | 1.223 |
| 08 | -1.665 | 1.224 | -1.689 | -1.493 |
| 09 | 0.218 | 0.868 | -2.173 | -1.347 |
| 10 | 1.198 | -1.347 | -1.493 | -1.597 |
| 11 | -0.291 | -1.313 | 1.037 | -1.816 |
| 12 | -2.731 | 1.336 | -2.96 | -2.546 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.289415 |
| 0.0005 | 4.374225 |
| 0.0001 | 6.665095 |