| Motif | ZN215.H14INVIVO.0.PSG.A |
| Gene (human) | ZNF215 (GeneCards) |
| Gene synonyms (human) | BAZ2, ZKSCAN11 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | ZN215.H14INVIVO.0.PSG.A |
| Gene (human) | ZNF215 (GeneCards) |
| Gene synonyms (human) | BAZ2, ZKSCAN11 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 10 |
| Consensus | bGCRCCTYCb |
| GC content | 72.29% |
| Information content (bits; total / per base) | 11.158 / 1.116 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX |
| Aligned words | 485 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 2 (2) | 0.776 | 0.792 | 0.65 | 0.675 | 0.71 | 0.732 | 52.234 | 62.959 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| GFPIVT, 1 experiments | median | 0.972 | 0.955 | 0.935 | 0.911 | 0.822 | 0.813 |
| best | 0.972 | 0.955 | 0.935 | 0.911 | 0.822 | 0.813 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| GFPIVT, 1 experiments | median | 85.638 | 0.767 | 0.781 | 0.643 |
| best | 227.268 | 0.795 | 0.827 | 0.687 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.18 |
| HGNC | HGNC:13007 |
| MGI | |
| EntrezGene (human) | GeneID:7762 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN215_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9UL58 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 1 overall: 0 Lysate, 0 IVT, 1 GFPIVT |
| Genomic HT-SELEX | 1 overall: 0 Lysate, 0 IVT, 1 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZN215.H14INVIVO.0.PSG.A.pcm |
| PWM | ZN215.H14INVIVO.0.PSG.A.pwm |
| PFM | ZN215.H14INVIVO.0.PSG.A.pfm |
| Threshold to P-value map | ZN215.H14INVIVO.0.PSG.A.thr |
| Motif in other formats | |
| JASPAR format | ZN215.H14INVIVO.0.PSG.A_jaspar_format.txt |
| MEME format | ZN215.H14INVIVO.0.PSG.A_meme_format.meme |
| Transfac format | ZN215.H14INVIVO.0.PSG.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 77.0 | 127.0 | 81.0 | 200.0 |
| 02 | 21.0 | 19.0 | 444.0 | 1.0 |
| 03 | 49.0 | 421.0 | 2.0 | 13.0 |
| 04 | 92.0 | 4.0 | 360.0 | 29.0 |
| 05 | 6.0 | 417.0 | 61.0 | 1.0 |
| 06 | 3.0 | 469.0 | 3.0 | 10.0 |
| 07 | 0.0 | 7.0 | 2.0 | 476.0 |
| 08 | 20.0 | 357.0 | 48.0 | 60.0 |
| 09 | 11.0 | 429.0 | 5.0 | 40.0 |
| 10 | 48.0 | 191.0 | 59.0 | 187.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.159 | 0.262 | 0.167 | 0.412 |
| 02 | 0.043 | 0.039 | 0.915 | 0.002 |
| 03 | 0.101 | 0.868 | 0.004 | 0.027 |
| 04 | 0.19 | 0.008 | 0.742 | 0.06 |
| 05 | 0.012 | 0.86 | 0.126 | 0.002 |
| 06 | 0.006 | 0.967 | 0.006 | 0.021 |
| 07 | 0.0 | 0.014 | 0.004 | 0.981 |
| 08 | 0.041 | 0.736 | 0.099 | 0.124 |
| 09 | 0.023 | 0.885 | 0.01 | 0.082 |
| 10 | 0.099 | 0.394 | 0.122 | 0.386 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.447 | 0.046 | -0.397 | 0.495 |
| 02 | -1.695 | -1.788 | 1.289 | -3.876 |
| 03 | -0.888 | 1.236 | -3.545 | -2.133 |
| 04 | -0.272 | -3.097 | 1.08 | -1.391 |
| 05 | -2.79 | 1.226 | -0.675 | -3.876 |
| 06 | -3.296 | 1.343 | -3.296 | -2.364 |
| 07 | -4.375 | -2.665 | -3.545 | 1.358 |
| 08 | -1.74 | 1.072 | -0.908 | -0.691 |
| 09 | -2.281 | 1.255 | -2.932 | -1.084 |
| 10 | -0.908 | 0.45 | -0.707 | 0.429 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.46531 |
| 0.0005 | 5.426395 |
| 0.0001 | 7.327225 |