| Motif | ZBT8A.H14RSNP.0.PSGI.D |
| Gene (human) | ZBTB8A (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Zbtb8a |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZBT8A.H14RSNP.0.PSGI.D |
| Gene (human) | ZBTB8A (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Zbtb8a |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 20 |
| Consensus | nhdRCGCCCdhWhhhvSvSn |
| GC content | 58.24% |
| Information content (bits; total / per base) | 13.341 / 0.667 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX + SMiLe-Seq |
| Aligned words | 6641 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 3 (3) | 0.809 | 0.817 | 0.633 | 0.634 | 0.583 | 0.591 | 54.77 | 70.699 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| overall, 3 experiments | median | 0.999 | 0.998 | 0.921 | 0.924 | 0.733 | 0.769 |
| best | 1.0 | 1.0 | 0.999 | 0.999 | 0.994 | 0.993 | |
| Lysate, 2 experiments | median | 1.0 | 0.999 | 0.96 | 0.962 | 0.863 | 0.881 |
| best | 1.0 | 1.0 | 0.999 | 0.999 | 0.994 | 0.993 | |
| IVT, 1 experiments | median | 0.94 | 0.929 | 0.803 | 0.796 | 0.672 | 0.687 |
| best | 0.94 | 0.929 | 0.803 | 0.796 | 0.672 | 0.687 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| Lysate, 2 experiments | median | 8.581 | 0.703 | 0.793 | 0.655 |
| best | 121.678 | 0.726 | 0.848 | 0.726 | |
| SMiLE-Seq benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 1 experiments | median | 0.573 | 0.547 | 0.551 | 0.534 | 0.537 | 0.526 |
| best | 0.573 | 0.547 | 0.551 | 0.534 | 0.537 | 0.526 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Other with up to three adjacent zinc fingers {2.3.2} (TFClass) |
| TF subfamily | BTB-POZ {2.3.2.1} (TFClass) |
| TFClass ID | TFClass: 2.3.2.1.255 |
| HGNC | |
| MGI | |
| EntrezGene (human) | |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZBT8A_HUMAN |
| UniProt ID (mouse) | ZBT8A_MOUSE |
| UniProt AC (human) | Q96BR9 (TFClass) |
| UniProt AC (mouse) | Q9CWH1 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 3 human, 0 mouse |
| HT-SELEX | 3 overall: 2 Lysate, 1 IVT, 0 GFPIVT |
| Genomic HT-SELEX | 2 overall: 2 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 1 |
| PBM | 0 |
| PCM | ZBT8A.H14RSNP.0.PSGI.D.pcm |
| PWM | ZBT8A.H14RSNP.0.PSGI.D.pwm |
| PFM | ZBT8A.H14RSNP.0.PSGI.D.pfm |
| Threshold to P-value map | ZBT8A.H14RSNP.0.PSGI.D.thr |
| Motif in other formats | |
| JASPAR format | ZBT8A.H14RSNP.0.PSGI.D_jaspar_format.txt |
| MEME format | ZBT8A.H14RSNP.0.PSGI.D_meme_format.meme |
| Transfac format | ZBT8A.H14RSNP.0.PSGI.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1753.75 | 2316.75 | 1099.75 | 1470.75 |
| 02 | 1083.25 | 2537.25 | 907.25 | 2113.25 |
| 03 | 1604.0 | 1054.0 | 1161.0 | 2822.0 |
| 04 | 4794.0 | 416.0 | 1096.0 | 335.0 |
| 05 | 385.0 | 6052.0 | 5.0 | 199.0 |
| 06 | 272.0 | 1.0 | 6364.0 | 4.0 |
| 07 | 2.0 | 6633.0 | 0.0 | 6.0 |
| 08 | 1.0 | 6640.0 | 0.0 | 0.0 |
| 09 | 4.0 | 6350.0 | 0.0 | 287.0 |
| 10 | 2098.0 | 737.0 | 843.0 | 2963.0 |
| 11 | 3719.0 | 875.0 | 410.0 | 1637.0 |
| 12 | 3512.0 | 1004.0 | 181.0 | 1944.0 |
| 13 | 2749.0 | 596.0 | 405.0 | 2891.0 |
| 14 | 2619.0 | 1170.0 | 685.0 | 2167.0 |
| 15 | 2645.0 | 1796.0 | 932.0 | 1268.0 |
| 16 | 1404.0 | 1456.0 | 3198.0 | 583.0 |
| 17 | 649.0 | 1756.0 | 3741.0 | 495.0 |
| 18 | 633.0 | 2616.0 | 2959.0 | 433.0 |
| 19 | 702.5 | 4398.5 | 894.5 | 645.5 |
| 20 | 1326.5 | 2204.5 | 1858.5 | 1251.5 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.264 | 0.349 | 0.166 | 0.221 |
| 02 | 0.163 | 0.382 | 0.137 | 0.318 |
| 03 | 0.242 | 0.159 | 0.175 | 0.425 |
| 04 | 0.722 | 0.063 | 0.165 | 0.05 |
| 05 | 0.058 | 0.911 | 0.001 | 0.03 |
| 06 | 0.041 | 0.0 | 0.958 | 0.001 |
| 07 | 0.0 | 0.999 | 0.0 | 0.001 |
| 08 | 0.0 | 1.0 | 0.0 | 0.0 |
| 09 | 0.001 | 0.956 | 0.0 | 0.043 |
| 10 | 0.316 | 0.111 | 0.127 | 0.446 |
| 11 | 0.56 | 0.132 | 0.062 | 0.246 |
| 12 | 0.529 | 0.151 | 0.027 | 0.293 |
| 13 | 0.414 | 0.09 | 0.061 | 0.435 |
| 14 | 0.394 | 0.176 | 0.103 | 0.326 |
| 15 | 0.398 | 0.27 | 0.14 | 0.191 |
| 16 | 0.211 | 0.219 | 0.482 | 0.088 |
| 17 | 0.098 | 0.264 | 0.563 | 0.075 |
| 18 | 0.095 | 0.394 | 0.446 | 0.065 |
| 19 | 0.106 | 0.662 | 0.135 | 0.097 |
| 20 | 0.2 | 0.332 | 0.28 | 0.188 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.055 | 0.333 | -0.411 | -0.121 |
| 02 | -0.426 | 0.424 | -0.603 | 0.241 |
| 03 | -0.034 | -0.454 | -0.357 | 0.53 |
| 04 | 1.06 | -1.38 | -0.415 | -1.595 |
| 05 | -1.457 | 1.292 | -5.442 | -2.112 |
| 06 | -1.802 | -6.253 | 1.343 | -5.591 |
| 07 | -5.981 | 1.384 | -6.627 | -5.312 |
| 08 | -6.253 | 1.385 | -6.627 | -6.627 |
| 09 | -5.591 | 1.341 | -6.627 | -1.749 |
| 10 | 0.234 | -0.81 | -0.676 | 0.579 |
| 11 | 0.806 | -0.639 | -1.395 | -0.014 |
| 12 | 0.749 | -0.502 | -2.205 | 0.158 |
| 13 | 0.504 | -1.022 | -1.407 | 0.554 |
| 14 | 0.455 | -0.349 | -0.883 | 0.266 |
| 15 | 0.465 | 0.078 | -0.576 | -0.269 |
| 16 | -0.167 | -0.131 | 0.655 | -1.044 |
| 17 | -0.937 | 0.056 | 0.812 | -1.207 |
| 18 | -0.962 | 0.454 | 0.577 | -1.34 |
| 19 | -0.858 | 0.973 | -0.617 | -0.943 |
| 20 | -0.224 | 0.283 | 0.113 | -0.282 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.44476 |
| 0.0005 | 4.70451 |
| 0.0001 | 7.08566 |