| Motif | PURB.H14INVIVO.0.B.D |
| Gene (human) | PURB (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Purb |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | PURB.H14INVIVO.0.B.D |
| Gene (human) | PURB (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Purb |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 10 |
| Consensus | nhhWCChRCh |
| GC content | 55.06% |
| Information content (bits; total / per base) | 7.588 / 0.759 |
| Data sources | PBM |
| Aligned words | 706 |
| Previous names |
| PBM benchmarking | auROC, QNZS | auPR, QNZS | auROC, SD | auPR, SD | |
|---|---|---|---|---|---|
| Overall, 8 experiments | median | 0.905 | 0.012 | 0.88 | 0.08 |
| best | 0.912 | 0.013 | 0.897 | 0.084 | |
| TF superclass | Yet undefined DNA-binding domains {0} (TFClass) |
| TF class | Uncharacterized {0.0} (TFClass) |
| TF family | PUR {0.0.5} (TFClass) |
| TF subfamily | {0.0.5.0} (TFClass) |
| TFClass ID | TFClass: 0.0.5.0.2 |
| HGNC | HGNC:9702 |
| MGI | MGI:1338779 |
| EntrezGene (human) | GeneID:5814 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:19291 (SSTAR profile) |
| UniProt ID (human) | PURB_HUMAN |
| UniProt ID (mouse) | PURB_MOUSE |
| UniProt AC (human) | Q96QR8 (TFClass) |
| UniProt AC (mouse) | O35295 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 8 |
| PCM | PURB.H14INVIVO.0.B.D.pcm |
| PWM | PURB.H14INVIVO.0.B.D.pwm |
| PFM | PURB.H14INVIVO.0.B.D.pfm |
| Threshold to P-value map | PURB.H14INVIVO.0.B.D.thr |
| Motif in other formats | |
| JASPAR format | PURB.H14INVIVO.0.B.D_jaspar_format.txt |
| MEME format | PURB.H14INVIVO.0.B.D_meme_format.meme |
| Transfac format | PURB.H14INVIVO.0.B.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 225.0 | 187.0 | 110.0 | 184.0 |
| 02 | 270.0 | 168.0 | 65.0 | 203.0 |
| 03 | 242.0 | 164.0 | 69.0 | 231.0 |
| 04 | 383.0 | 0.0 | 144.0 | 179.0 |
| 05 | 0.0 | 706.0 | 0.0 | 0.0 |
| 06 | 0.0 | 706.0 | 0.0 | 0.0 |
| 07 | 189.0 | 364.0 | 70.0 | 83.0 |
| 08 | 486.0 | 15.0 | 124.0 | 81.0 |
| 09 | 76.0 | 629.0 | 1.0 | 0.0 |
| 10 | 188.0 | 313.0 | 52.0 | 153.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.319 | 0.265 | 0.156 | 0.261 |
| 02 | 0.382 | 0.238 | 0.092 | 0.288 |
| 03 | 0.343 | 0.232 | 0.098 | 0.327 |
| 04 | 0.542 | 0.0 | 0.204 | 0.254 |
| 05 | 0.0 | 1.0 | 0.0 | 0.0 |
| 06 | 0.0 | 1.0 | 0.0 | 0.0 |
| 07 | 0.268 | 0.516 | 0.099 | 0.118 |
| 08 | 0.688 | 0.021 | 0.176 | 0.115 |
| 09 | 0.108 | 0.891 | 0.001 | 0.0 |
| 10 | 0.266 | 0.443 | 0.074 | 0.217 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.241 | 0.057 | -0.467 | 0.041 |
| 02 | 0.422 | -0.049 | -0.983 | 0.139 |
| 03 | 0.313 | -0.073 | -0.925 | 0.267 |
| 04 | 0.77 | -4.688 | -0.201 | 0.014 |
| 05 | -4.688 | 1.379 | -4.688 | -4.688 |
| 06 | -4.688 | 1.379 | -4.688 | -4.688 |
| 07 | 0.068 | 0.719 | -0.911 | -0.744 |
| 08 | 1.007 | -2.371 | -0.349 | -0.768 |
| 09 | -0.83 | 1.264 | -4.212 | -4.688 |
| 10 | 0.063 | 0.569 | -1.2 | -0.141 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.368205 |
| 0.0005 | 5.90136 |
| 0.0001 | 6.837065 |