| Motif | P73.H14RSNP.1.P.D |
| Gene (human) | TP73 (GeneCards) |
| Gene synonyms (human) | P73 |
| Gene (mouse) | Tp73 |
| Gene synonyms (mouse) | P73, Trp73 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | P73.H14RSNP.1.P.D |
| Gene (human) | TP73 (GeneCards) |
| Gene synonyms (human) | P73 |
| Gene (mouse) | Tp73 |
| Gene synonyms (mouse) | P73, Trp73 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 11 |
| Consensus | hhRGRCWTGYh |
| GC content | 53.14% |
| Information content (bits; total / per base) | 9.889 / 0.899 |
| Data sources | ChIP-Seq |
| Aligned words | 984 |
| Previous names | P73.H12RSNP.1.P.D |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 3 (21) | 0.878 | 0.933 | 0.79 | 0.871 | 0.816 | 0.879 | 2.649 | 3.281 | 289.721 | 512.658 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 1 experiments | median | 0.972 | 0.959 | 0.916 | 0.896 | 0.766 | 0.775 |
| best | 0.972 | 0.959 | 0.916 | 0.896 | 0.766 | 0.775 | |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | p53 domain factors {6.3} (TFClass) |
| TF family | p53-related {6.3.1} (TFClass) |
| TF subfamily | {6.3.1.0} (TFClass) |
| TFClass ID | TFClass: 6.3.1.0.3 |
| HGNC | HGNC:12003 |
| MGI | MGI:1336991 |
| EntrezGene (human) | GeneID:7161 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:22062 (SSTAR profile) |
| UniProt ID (human) | P73_HUMAN |
| UniProt ID (mouse) | P73_MOUSE |
| UniProt AC (human) | O15350 (TFClass) |
| UniProt AC (mouse) | Q9JJP2 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 3 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | P73.H14RSNP.1.P.D.pcm |
| PWM | P73.H14RSNP.1.P.D.pwm |
| PFM | P73.H14RSNP.1.P.D.pfm |
| Threshold to P-value map | P73.H14RSNP.1.P.D.thr |
| Motif in other formats | |
| JASPAR format | P73.H14RSNP.1.P.D_jaspar_format.txt |
| MEME format | P73.H14RSNP.1.P.D_meme_format.meme |
| Transfac format | P73.H14RSNP.1.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 150.0 | 517.0 | 58.0 | 259.0 |
| 02 | 127.0 | 453.0 | 124.0 | 280.0 |
| 03 | 523.0 | 6.0 | 327.0 | 128.0 |
| 04 | 63.0 | 8.0 | 883.0 | 30.0 |
| 05 | 411.0 | 7.0 | 552.0 | 14.0 |
| 06 | 14.0 | 958.0 | 9.0 | 3.0 |
| 07 | 637.0 | 57.0 | 37.0 | 253.0 |
| 08 | 116.0 | 14.0 | 29.0 | 825.0 |
| 09 | 5.0 | 15.0 | 958.0 | 6.0 |
| 10 | 48.0 | 313.0 | 4.0 | 619.0 |
| 11 | 143.0 | 349.0 | 74.0 | 418.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.152 | 0.525 | 0.059 | 0.263 |
| 02 | 0.129 | 0.46 | 0.126 | 0.285 |
| 03 | 0.532 | 0.006 | 0.332 | 0.13 |
| 04 | 0.064 | 0.008 | 0.897 | 0.03 |
| 05 | 0.418 | 0.007 | 0.561 | 0.014 |
| 06 | 0.014 | 0.974 | 0.009 | 0.003 |
| 07 | 0.647 | 0.058 | 0.038 | 0.257 |
| 08 | 0.118 | 0.014 | 0.029 | 0.838 |
| 09 | 0.005 | 0.015 | 0.974 | 0.006 |
| 10 | 0.049 | 0.318 | 0.004 | 0.629 |
| 11 | 0.145 | 0.355 | 0.075 | 0.425 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.49 | 0.739 | -1.423 | 0.051 |
| 02 | -0.655 | 0.607 | -0.678 | 0.129 |
| 03 | 0.751 | -3.468 | 0.283 | -0.647 |
| 04 | -1.342 | -3.238 | 1.273 | -2.055 |
| 05 | 0.51 | -3.346 | 0.804 | -2.757 |
| 06 | -2.757 | 1.354 | -3.14 | -3.96 |
| 07 | 0.947 | -1.439 | -1.856 | 0.028 |
| 08 | -0.744 | -2.757 | -2.087 | 1.205 |
| 09 | -3.607 | -2.696 | 1.354 | -3.468 |
| 10 | -1.606 | 0.239 | -3.768 | 0.919 |
| 11 | -0.537 | 0.348 | -1.185 | 0.527 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.78085 |
| 0.0005 | 5.658785 |
| 0.0001 | 7.431975 |