| Motif | MYB.H14CORE.0.P.B |
| Gene (human) | MYB (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Myb |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | MYB.H14CORE.0.P.B |
| Gene (human) | MYB (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Myb |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 11 |
| Consensus | RRCvGTTRvnn |
| GC content | 53.04% |
| Information content (bits; total / per base) | 9.386 / 0.853 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| Previous names | MYB.H12CORE.0.P.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 13 (85) | 0.859 | 0.952 | 0.743 | 0.889 | 0.763 | 0.895 | 2.088 | 3.117 | 175.409 | 365.959 |
| Mouse | 2 (13) | 0.883 | 0.907 | 0.775 | 0.798 | 0.805 | 0.835 | 2.248 | 2.399 | 194.284 | 308.699 |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 2.815 | 1.469 | 0.262 | 0.152 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Tryptophan cluster factors {3.5} (TFClass) |
| TF family | Myb/SANT domain {3.5.1} (TFClass) |
| TF subfamily | Myb-like {3.5.1.1} (TFClass) |
| TFClass ID | TFClass: 3.5.1.1.1 |
| HGNC | HGNC:7545 |
| MGI | MGI:97249 |
| EntrezGene (human) | GeneID:4602 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17863 (SSTAR profile) |
| UniProt ID (human) | MYB_HUMAN |
| UniProt ID (mouse) | MYB_MOUSE |
| UniProt AC (human) | P10242 (TFClass) |
| UniProt AC (mouse) | P06876 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 13 human, 2 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | MYB.H14CORE.0.P.B.pcm |
| PWM | MYB.H14CORE.0.P.B.pwm |
| PFM | MYB.H14CORE.0.P.B.pfm |
| Threshold to P-value map | MYB.H14CORE.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | MYB.H14CORE.0.P.B_jaspar_format.txt |
| MEME format | MYB.H14CORE.0.P.B_meme_format.meme |
| Transfac format | MYB.H14CORE.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 246.0 | 7.0 | 613.0 | 134.0 |
| 02 | 267.0 | 17.0 | 544.0 | 172.0 |
| 03 | 16.0 | 973.0 | 10.0 | 1.0 |
| 04 | 504.0 | 310.0 | 116.0 | 70.0 |
| 05 | 1.0 | 5.0 | 992.0 | 2.0 |
| 06 | 7.0 | 16.0 | 46.0 | 931.0 |
| 07 | 2.0 | 1.0 | 8.0 | 989.0 |
| 08 | 352.0 | 5.0 | 521.0 | 122.0 |
| 09 | 270.0 | 208.0 | 391.0 | 131.0 |
| 10 | 321.0 | 265.0 | 223.0 | 191.0 |
| 11 | 274.0 | 209.0 | 354.0 | 163.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.246 | 0.007 | 0.613 | 0.134 |
| 02 | 0.267 | 0.017 | 0.544 | 0.172 |
| 03 | 0.016 | 0.973 | 0.01 | 0.001 |
| 04 | 0.504 | 0.31 | 0.116 | 0.07 |
| 05 | 0.001 | 0.005 | 0.992 | 0.002 |
| 06 | 0.007 | 0.016 | 0.046 | 0.931 |
| 07 | 0.002 | 0.001 | 0.008 | 0.989 |
| 08 | 0.352 | 0.005 | 0.521 | 0.122 |
| 09 | 0.27 | 0.208 | 0.391 | 0.131 |
| 10 | 0.321 | 0.265 | 0.223 | 0.191 |
| 11 | 0.274 | 0.209 | 0.354 | 0.163 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.016 | -3.362 | 0.893 | -0.618 |
| 02 | 0.065 | -2.598 | 0.774 | -0.371 |
| 03 | -2.653 | 1.354 | -3.066 | -4.525 |
| 04 | 0.698 | 0.214 | -0.76 | -1.255 |
| 05 | -4.525 | -3.622 | 1.373 | -4.213 |
| 06 | -3.362 | -2.653 | -1.663 | 1.31 |
| 07 | -4.213 | -4.525 | -3.253 | 1.37 |
| 08 | 0.34 | -3.622 | 0.731 | -0.71 |
| 09 | 0.076 | -0.183 | 0.445 | -0.64 |
| 10 | 0.248 | 0.058 | -0.113 | -0.267 |
| 11 | 0.091 | -0.178 | 0.346 | -0.424 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.09765 |
| 0.0005 | 6.091635 |
| 0.0001 | 7.485025 |