| Motif | MAFF.H14INVITRO.0.PSM.A |
| Gene (human) | MAFF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Maff |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | MAFF.H14INVITRO.0.PSM.A |
| Gene (human) | MAFF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Maff |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 18 |
| Consensus | WGMWRWSTCAGCAdWWhh |
| GC content | 42.18% |
| Information content (bits; total / per base) | 18.603 / 1.034 |
| Data sources | ChIP-Seq + HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 850 |
| Previous names | MAFF.H12INVITRO.0.PSM.A |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (14) | 0.972 | 0.98 | 0.96 | 0.972 | 0.962 | 0.973 | 6.49 | 7.08 | 853.673 | 1017.921 |
| Mouse | 7 (48) | 0.925 | 0.958 | 0.91 | 0.947 | 0.919 | 0.952 | 6.05 | 7.189 | 339.542 | 678.187 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 4 experiments | median | 0.986 | 0.982 | 0.924 | 0.92 | 0.833 | 0.841 |
| best | 1.0 | 0.999 | 0.999 | 0.998 | 0.993 | 0.991 | |
| Methyl HT-SELEX, 2 experiments | median | 0.986 | 0.982 | 0.924 | 0.92 | 0.833 | 0.841 |
| best | 0.999 | 0.998 | 0.994 | 0.992 | 0.965 | 0.959 | |
| Non-Methyl HT-SELEX, 2 experiments | median | 0.781 | 0.785 | 0.764 | 0.767 | 0.752 | 0.755 |
| best | 1.0 | 0.999 | 0.999 | 0.998 | 0.993 | 0.991 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 2 | 0.796 | 0.703 | 0.753 | 0.537 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Maf-related {1.1.3} (TFClass) |
| TF subfamily | Small MAF {1.1.3.2} (TFClass) |
| TFClass ID | TFClass: 1.1.3.2.1 |
| HGNC | HGNC:6780 |
| MGI | MGI:96910 |
| EntrezGene (human) | GeneID:23764 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17133 (SSTAR profile) |
| UniProt ID (human) | MAFF_HUMAN |
| UniProt ID (mouse) | MAFF_MOUSE |
| UniProt AC (human) | Q9ULX9 (TFClass) |
| UniProt AC (mouse) | O54791 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 7 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 2 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | MAFF.H14INVITRO.0.PSM.A.pcm |
| PWM | MAFF.H14INVITRO.0.PSM.A.pwm |
| PFM | MAFF.H14INVITRO.0.PSM.A.pfm |
| Threshold to P-value map | MAFF.H14INVITRO.0.PSM.A.thr |
| Motif in other formats | |
| JASPAR format | MAFF.H14INVITRO.0.PSM.A_jaspar_format.txt |
| MEME format | MAFF.H14INVITRO.0.PSM.A_meme_format.meme |
| Transfac format | MAFF.H14INVITRO.0.PSM.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 111.0 | 68.0 | 74.0 | 597.0 |
| 02 | 32.0 | 87.0 | 719.0 | 12.0 |
| 03 | 160.0 | 611.0 | 8.0 | 71.0 |
| 04 | 115.0 | 107.0 | 5.0 | 623.0 |
| 05 | 139.0 | 37.0 | 570.0 | 104.0 |
| 06 | 678.0 | 29.0 | 48.0 | 95.0 |
| 07 | 67.0 | 330.0 | 428.0 | 25.0 |
| 08 | 1.0 | 0.0 | 2.0 | 847.0 |
| 09 | 19.0 | 830.0 | 0.0 | 1.0 |
| 10 | 848.0 | 0.0 | 1.0 | 1.0 |
| 11 | 0.0 | 0.0 | 770.0 | 80.0 |
| 12 | 0.0 | 847.0 | 3.0 | 0.0 |
| 13 | 792.0 | 2.0 | 25.0 | 31.0 |
| 14 | 329.0 | 110.0 | 168.0 | 243.0 |
| 15 | 382.0 | 28.0 | 23.0 | 417.0 |
| 16 | 306.0 | 34.0 | 14.0 | 496.0 |
| 17 | 251.0 | 133.0 | 35.0 | 431.0 |
| 18 | 149.0 | 193.0 | 114.0 | 394.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.131 | 0.08 | 0.087 | 0.702 |
| 02 | 0.038 | 0.102 | 0.846 | 0.014 |
| 03 | 0.188 | 0.719 | 0.009 | 0.084 |
| 04 | 0.135 | 0.126 | 0.006 | 0.733 |
| 05 | 0.164 | 0.044 | 0.671 | 0.122 |
| 06 | 0.798 | 0.034 | 0.056 | 0.112 |
| 07 | 0.079 | 0.388 | 0.504 | 0.029 |
| 08 | 0.001 | 0.0 | 0.002 | 0.996 |
| 09 | 0.022 | 0.976 | 0.0 | 0.001 |
| 10 | 0.998 | 0.0 | 0.001 | 0.001 |
| 11 | 0.0 | 0.0 | 0.906 | 0.094 |
| 12 | 0.0 | 0.996 | 0.004 | 0.0 |
| 13 | 0.932 | 0.002 | 0.029 | 0.036 |
| 14 | 0.387 | 0.129 | 0.198 | 0.286 |
| 15 | 0.449 | 0.033 | 0.027 | 0.491 |
| 16 | 0.36 | 0.04 | 0.016 | 0.584 |
| 17 | 0.295 | 0.156 | 0.041 | 0.507 |
| 18 | 0.175 | 0.227 | 0.134 | 0.464 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.642 | -1.123 | -1.04 | 1.028 |
| 02 | -1.85 | -0.882 | 1.213 | -2.75 |
| 03 | -0.281 | 1.051 | -3.096 | -1.081 |
| 04 | -0.607 | -0.678 | -3.467 | 1.07 |
| 05 | -0.42 | -1.711 | 0.982 | -0.706 |
| 06 | 1.155 | -1.943 | -1.461 | -0.795 |
| 07 | -1.137 | 0.437 | 0.696 | -2.083 |
| 08 | -4.379 | -4.844 | -4.062 | 1.377 |
| 09 | -2.337 | 1.357 | -4.844 | -4.379 |
| 10 | 1.378 | -4.844 | -4.379 | -4.379 |
| 11 | -4.844 | -4.844 | 1.282 | -0.964 |
| 12 | -4.844 | 1.377 | -3.822 | -4.844 |
| 13 | 1.31 | -4.062 | -2.083 | -1.88 |
| 14 | 0.434 | -0.651 | -0.233 | 0.133 |
| 15 | 0.583 | -1.976 | -2.161 | 0.67 |
| 16 | 0.362 | -1.792 | -2.614 | 0.843 |
| 17 | 0.165 | -0.464 | -1.764 | 0.703 |
| 18 | -0.352 | -0.095 | -0.616 | 0.614 |
| P-value | Threshold |
|---|---|
| 0.001 | 0.78021 |
| 0.0005 | 2.23436 |
| 0.0001 | 5.27436 |