| Motif | KAISO.H14CORE.0.P.B |
| Gene (human) | ZBTB33 (GeneCards) |
| Gene synonyms (human) | KAISO, ZNF348 |
| Gene (mouse) | Zbtb33 |
| Gene synonyms (mouse) | Kaiso |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | KAISO.H14CORE.0.P.B |
| Gene (human) | ZBTB33 (GeneCards) |
| Gene synonyms (human) | KAISO, ZNF348 |
| Gene (mouse) | Zbtb33 |
| Gene synonyms (mouse) | Kaiso |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 11 |
| Consensus | bMbCGCGAGAn |
| GC content | 62.85% |
| Information content (bits; total / per base) | 11.896 / 1.081 |
| Data sources | ChIP-Seq |
| Aligned words | 999 |
| Previous names | KAISO.H12CORE.0.P.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 15 (99) | 0.839 | 0.959 | 0.818 | 0.962 | 0.774 | 0.954 | 3.691 | 6.091 | 238.658 | 470.018 |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 2.576 | 5.046 | 0.104 | 0.067 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Other with up to three adjacent zinc fingers {2.3.2} (TFClass) |
| TF subfamily | BTB-POZ {2.3.2.1} (TFClass) |
| TFClass ID | TFClass: 2.3.2.1.12 |
| HGNC | HGNC:16682 |
| MGI | MGI:1927290 |
| EntrezGene (human) | GeneID:10009 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:56805 (SSTAR profile) |
| UniProt ID (human) | KAISO_HUMAN |
| UniProt ID (mouse) | KAISO_MOUSE |
| UniProt AC (human) | Q86T24 (TFClass) |
| UniProt AC (mouse) | Q8BN78 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 15 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | KAISO.H14CORE.0.P.B.pcm |
| PWM | KAISO.H14CORE.0.P.B.pwm |
| PFM | KAISO.H14CORE.0.P.B.pfm |
| Threshold to P-value map | KAISO.H14CORE.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | KAISO.H14CORE.0.P.B_jaspar_format.txt |
| MEME format | KAISO.H14CORE.0.P.B_meme_format.meme |
| Transfac format | KAISO.H14CORE.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 106.0 | 265.0 | 116.0 | 512.0 |
| 02 | 297.0 | 540.0 | 113.0 | 49.0 |
| 03 | 102.0 | 222.0 | 131.0 | 544.0 |
| 04 | 19.0 | 961.0 | 7.0 | 12.0 |
| 05 | 98.0 | 7.0 | 886.0 | 8.0 |
| 06 | 14.0 | 955.0 | 10.0 | 20.0 |
| 07 | 21.0 | 3.0 | 971.0 | 4.0 |
| 08 | 905.0 | 6.0 | 82.0 | 6.0 |
| 09 | 6.0 | 15.0 | 964.0 | 14.0 |
| 10 | 803.0 | 55.0 | 116.0 | 25.0 |
| 11 | 293.0 | 176.0 | 306.0 | 224.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.106 | 0.265 | 0.116 | 0.513 |
| 02 | 0.297 | 0.541 | 0.113 | 0.049 |
| 03 | 0.102 | 0.222 | 0.131 | 0.545 |
| 04 | 0.019 | 0.962 | 0.007 | 0.012 |
| 05 | 0.098 | 0.007 | 0.887 | 0.008 |
| 06 | 0.014 | 0.956 | 0.01 | 0.02 |
| 07 | 0.021 | 0.003 | 0.972 | 0.004 |
| 08 | 0.906 | 0.006 | 0.082 | 0.006 |
| 09 | 0.006 | 0.015 | 0.965 | 0.014 |
| 10 | 0.804 | 0.055 | 0.116 | 0.025 |
| 11 | 0.293 | 0.176 | 0.306 | 0.224 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.848 | 0.059 | -0.759 | 0.714 |
| 02 | 0.172 | 0.767 | -0.785 | -1.601 |
| 03 | -0.886 | -0.117 | -0.639 | 0.775 |
| 04 | -2.496 | 1.342 | -3.361 | -2.908 |
| 05 | -0.925 | -3.361 | 1.261 | -3.252 |
| 06 | -2.772 | 1.336 | -3.065 | -2.449 |
| 07 | -2.404 | -3.974 | 1.353 | -3.782 |
| 08 | 1.282 | -3.483 | -1.1 | -3.483 |
| 09 | -3.483 | -2.71 | 1.346 | -2.772 |
| 10 | 1.163 | -1.489 | -0.759 | -2.242 |
| 11 | 0.159 | -0.347 | 0.202 | -0.108 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.134415 |
| 0.0005 | 5.15079 |
| 0.0001 | 7.236015 |