MotifGLYR1.H14RSNP.0.B.D
Gene (human)GLYR1
(GeneCards)
Gene synonyms (human)
Gene (mouse)Glyr1
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length7
ConsensusnAAAThn
GC content15.84%
Information content (bits; total / per base)8.226 / 1.175
Data sourcesPBM
Aligned words562
Previous names

PBM benchmarking auROC, QNZS auPR, QNZS auROC, SD auPR, SD
Overall, 11 experiments median 0.748 0.007 0.837 0.023
best 0.875 0.038 0.9 0.039
TF superclassbeta-Sheet binding to DNA {8} (TFClass)
TF classA.T hook factors {8.2} (TFClass)
TF familyUnannotated {8.2.255} (TFClass)
TF subfamily {8.2.255.0} (TFClass)
TFClass IDTFClass: 8.2.255.0.3
HGNC
MGI
EntrezGene (human)
EntrezGene (mouse)
UniProt ID (human)GLYR1_HUMAN
UniProt ID (mouse)GLYR1_MOUSE
UniProt AC (human)Q49A26
(TFClass)
UniProt AC (mouse)Q922P9
(TFClass)
GRECO-DB-TF
no
ChIP-Seq 0 human, 0 mouse
HT-SELEX 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT
Genomic HT-SELEX 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT
SMiLE-Seq 0
PBM 11
PCM
ACGT
01203.083.0133.0143.0
02562.00.00.00.0
03562.00.00.00.0
04562.00.00.00.0
050.00.00.0562.0
06187.093.070.0212.0
07176.0108.0136.0142.0
PFM
ACGT
010.3610.1480.2370.254
021.00.00.00.0
031.00.00.00.0
041.00.00.00.0
050.00.00.01.0
060.3330.1650.1250.377
070.3130.1920.2420.253
PWM
ACGT
010.365-0.519-0.0540.017
021.378-4.497-4.497-4.497
031.378-4.497-4.497-4.497
041.378-4.497-4.497-4.497
05-4.497-4.497-4.4971.378
060.283-0.407-0.6860.408
070.223-0.26-0.0320.011
Standard thresholds
P-value Threshold
0.001 5.80459
0.0005 6.0334
0.0001 6.349525