| Motif | FOSB.H14INVITRO.0.P.B |
| Gene (human) | FOSB (GeneCards) |
| Gene synonyms (human) | G0S3 |
| Gene (mouse) | Fosb |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | FOSB.H14INVITRO.0.P.B |
| Gene (human) | FOSB (GeneCards) |
| Gene synonyms (human) | G0S3 |
| Gene (mouse) | Fosb |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 9 |
| Consensus | vTGAGTCAb |
| GC content | 42.58% |
| Information content (bits; total / per base) | 11.443 / 1.271 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| Previous names | FOSB.H12INVITRO.0.P.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (6) | 0.976 | 0.983 | 0.948 | 0.965 | 0.972 | 0.977 | 4.304 | 4.414 | 478.757 | 505.398 |
| Mouse | 4 (27) | 0.854 | 0.901 | 0.79 | 0.856 | 0.834 | 0.883 | 2.964 | 3.373 | 119.347 | 184.469 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Methyl HT-SELEX, 1 experiments | median | 0.805 | 0.785 | 0.692 | 0.679 | 0.62 | 0.617 |
| best | 0.805 | 0.785 | 0.692 | 0.679 | 0.62 | 0.617 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Fos-related {1.1.2} (TFClass) |
| TF subfamily | Fos {1.1.2.1} (TFClass) |
| TFClass ID | TFClass: 1.1.2.1.2 |
| HGNC | HGNC:3797 |
| MGI | MGI:95575 |
| EntrezGene (human) | GeneID:2354 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:14282 (SSTAR profile) |
| UniProt ID (human) | FOSB_HUMAN |
| UniProt ID (mouse) | FOSB_MOUSE |
| UniProt AC (human) | P53539 (TFClass) |
| UniProt AC (mouse) | P13346 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 4 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 1 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | FOSB.H14INVITRO.0.P.B.pcm |
| PWM | FOSB.H14INVITRO.0.P.B.pwm |
| PFM | FOSB.H14INVITRO.0.P.B.pfm |
| Threshold to P-value map | FOSB.H14INVITRO.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | FOSB.H14INVITRO.0.P.B_jaspar_format.txt |
| MEME format | FOSB.H14INVITRO.0.P.B_meme_format.meme |
| Transfac format | FOSB.H14INVITRO.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 416.0 | 233.0 | 280.0 | 71.0 |
| 02 | 9.0 | 5.0 | 14.0 | 972.0 |
| 03 | 7.0 | 30.0 | 860.0 | 103.0 |
| 04 | 910.0 | 10.0 | 3.0 | 77.0 |
| 05 | 166.0 | 0.0 | 834.0 | 0.0 |
| 06 | 14.0 | 19.0 | 20.0 | 947.0 |
| 07 | 42.0 | 947.0 | 11.0 | 0.0 |
| 08 | 972.0 | 5.0 | 5.0 | 18.0 |
| 09 | 49.0 | 380.0 | 176.0 | 395.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.416 | 0.233 | 0.28 | 0.071 |
| 02 | 0.009 | 0.005 | 0.014 | 0.972 |
| 03 | 0.007 | 0.03 | 0.86 | 0.103 |
| 04 | 0.91 | 0.01 | 0.003 | 0.077 |
| 05 | 0.166 | 0.0 | 0.834 | 0.0 |
| 06 | 0.014 | 0.019 | 0.02 | 0.947 |
| 07 | 0.042 | 0.947 | 0.011 | 0.0 |
| 08 | 0.972 | 0.005 | 0.005 | 0.018 |
| 09 | 0.049 | 0.38 | 0.176 | 0.395 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.506 | -0.07 | 0.113 | -1.242 |
| 02 | -3.156 | -3.622 | -2.773 | 1.353 |
| 03 | -3.362 | -2.071 | 1.231 | -0.877 |
| 04 | 1.287 | -3.066 | -3.975 | -1.162 |
| 05 | -0.406 | -4.982 | 1.2 | -4.982 |
| 06 | -2.773 | -2.497 | -2.45 | 1.327 |
| 07 | -1.75 | 1.327 | -2.985 | -4.982 |
| 08 | 1.353 | -3.622 | -3.622 | -2.546 |
| 09 | -1.602 | 0.416 | -0.348 | 0.455 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.23659 |
| 0.0005 | 5.32531 |
| 0.0001 | 7.45081 |