| Motif | ETV7.H14CORE.0.SM.B |
| Gene (human) | ETV7 (GeneCards) |
| Gene synonyms (human) | TEL2, TELB, TREF |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | ETV7.H14CORE.0.SM.B |
| Gene (human) | ETV7 (GeneCards) |
| Gene synonyms (human) | TEL2, TELB, TREF |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 19 |
| Consensus | ddMSSGGAAGYRhhdvbbn |
| GC content | 53.93% |
| Information content (bits; total / per base) | 14.89 / 0.784 |
| Data sources | HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 9974 |
| Previous names | ETV7.H12CORE.0.SM.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (7) | 0.637 | 0.652 | 0.479 | 0.499 | 0.611 | 0.627 | 1.463 | 1.551 | 2.125 | 6.509 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 2 experiments | median | 0.972 | 0.967 | 0.892 | 0.894 | 0.816 | 0.83 |
| best | 1.0 | 1.0 | 0.999 | 0.998 | 0.988 | 0.986 | |
| Methyl HT-SELEX, 1 experiments | median | 0.945 | 0.935 | 0.786 | 0.789 | 0.644 | 0.674 |
| best | 0.945 | 0.935 | 0.786 | 0.789 | 0.644 | 0.674 | |
| Non-Methyl HT-SELEX, 1 experiments | median | 1.0 | 1.0 | 0.999 | 0.998 | 0.988 | 0.986 |
| best | 1.0 | 1.0 | 0.999 | 0.998 | 0.988 | 0.986 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 1 | 0.785 | 0.409 | 0.709 | 0.401 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Tryptophan cluster factors {3.5} (TFClass) |
| TF family | Ets-related {3.5.2} (TFClass) |
| TF subfamily | ETV6-like {3.5.2.6} (TFClass) |
| TFClass ID | TFClass: 3.5.2.6.2 |
| HGNC | HGNC:18160 |
| MGI | |
| EntrezGene (human) | GeneID:51513 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ETV7_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9Y603 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 1 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ETV7.H14CORE.0.SM.B.pcm |
| PWM | ETV7.H14CORE.0.SM.B.pwm |
| PFM | ETV7.H14CORE.0.SM.B.pfm |
| Threshold to P-value map | ETV7.H14CORE.0.SM.B.thr |
| Motif in other formats | |
| JASPAR format | ETV7.H14CORE.0.SM.B_jaspar_format.txt |
| MEME format | ETV7.H14CORE.0.SM.B_meme_format.meme |
| Transfac format | ETV7.H14CORE.0.SM.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2004.75 | 1432.75 | 1566.75 | 4969.75 |
| 02 | 2561.25 | 904.25 | 1161.25 | 5347.25 |
| 03 | 1626.0 | 6347.0 | 878.0 | 1123.0 |
| 04 | 706.0 | 7762.0 | 1307.0 | 199.0 |
| 05 | 865.0 | 6765.0 | 2160.0 | 184.0 |
| 06 | 6.0 | 0.0 | 9968.0 | 0.0 |
| 07 | 0.0 | 1.0 | 9973.0 | 0.0 |
| 08 | 9951.0 | 0.0 | 0.0 | 23.0 |
| 09 | 9836.0 | 26.0 | 2.0 | 110.0 |
| 10 | 2028.0 | 116.0 | 7809.0 | 21.0 |
| 11 | 350.0 | 1929.0 | 146.0 | 7549.0 |
| 12 | 5596.0 | 457.0 | 3161.0 | 760.0 |
| 13 | 1741.0 | 4742.0 | 1357.0 | 2134.0 |
| 14 | 1657.0 | 1441.0 | 1420.0 | 5456.0 |
| 15 | 1451.0 | 1450.0 | 1552.0 | 5521.0 |
| 16 | 1311.0 | 6051.0 | 1353.0 | 1259.0 |
| 17 | 1133.0 | 5657.0 | 1977.0 | 1207.0 |
| 18 | 1608.5 | 1795.5 | 4147.5 | 2422.5 |
| 19 | 2564.0 | 2623.0 | 2767.0 | 2020.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.201 | 0.144 | 0.157 | 0.498 |
| 02 | 0.257 | 0.091 | 0.116 | 0.536 |
| 03 | 0.163 | 0.636 | 0.088 | 0.113 |
| 04 | 0.071 | 0.778 | 0.131 | 0.02 |
| 05 | 0.087 | 0.678 | 0.217 | 0.018 |
| 06 | 0.001 | 0.0 | 0.999 | 0.0 |
| 07 | 0.0 | 0.0 | 1.0 | 0.0 |
| 08 | 0.998 | 0.0 | 0.0 | 0.002 |
| 09 | 0.986 | 0.003 | 0.0 | 0.011 |
| 10 | 0.203 | 0.012 | 0.783 | 0.002 |
| 11 | 0.035 | 0.193 | 0.015 | 0.757 |
| 12 | 0.561 | 0.046 | 0.317 | 0.076 |
| 13 | 0.175 | 0.475 | 0.136 | 0.214 |
| 14 | 0.166 | 0.144 | 0.142 | 0.547 |
| 15 | 0.145 | 0.145 | 0.156 | 0.554 |
| 16 | 0.131 | 0.607 | 0.136 | 0.126 |
| 17 | 0.114 | 0.567 | 0.198 | 0.121 |
| 18 | 0.161 | 0.18 | 0.416 | 0.243 |
| 19 | 0.257 | 0.263 | 0.277 | 0.203 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.218 | -0.553 | -0.464 | 0.689 |
| 02 | 0.027 | -1.013 | -0.763 | 0.762 |
| 03 | -0.427 | 0.934 | -1.042 | -0.797 |
| 04 | -1.259 | 1.135 | -0.645 | -2.518 |
| 05 | -1.057 | 0.997 | -0.143 | -2.595 |
| 06 | -5.706 | -6.989 | 1.385 | -6.989 |
| 07 | -6.989 | -6.628 | 1.386 | -6.989 |
| 08 | 1.383 | -6.989 | -6.989 | -4.591 |
| 09 | 1.372 | -4.479 | -6.363 | -3.101 |
| 10 | -0.206 | -3.049 | 1.141 | -4.674 |
| 11 | -1.958 | -0.256 | -2.823 | 1.107 |
| 12 | 0.808 | -1.693 | 0.237 | -1.186 |
| 13 | -0.359 | 0.642 | -0.608 | -0.156 |
| 14 | -0.408 | -0.548 | -0.562 | 0.783 |
| 15 | -0.541 | -0.541 | -0.474 | 0.794 |
| 16 | -0.642 | 0.886 | -0.611 | -0.682 |
| 17 | -0.788 | 0.819 | -0.232 | -0.725 |
| 18 | -0.438 | -0.328 | 0.508 | -0.029 |
| 19 | 0.028 | 0.051 | 0.104 | -0.21 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.36281 |
| 0.0005 | 3.85736 |
| 0.0001 | 6.67936 |