| Motif | CR3L2.H14RSNP.0.PS.D |
| Gene (human) | CREB3L2 (GeneCards) |
| Gene synonyms (human) | BBF2H7 |
| Gene (mouse) | Creb3l2 |
| Gene synonyms (mouse) | Bbf2h7 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | CR3L2.H14RSNP.0.PS.D |
| Gene (human) | CREB3L2 (GeneCards) |
| Gene synonyms (human) | BBF2H7 |
| Gene (mouse) | Creb3l2 |
| Gene synonyms (mouse) | Bbf2h7 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | nnbWCGTGKbv |
| GC content | 59.11% |
| Information content (bits; total / per base) | 9.784 / 0.889 |
| Data sources | ChIP-Seq + HT-SELEX |
| Aligned words | 2350 |
| Previous names | CR3L2.H12RSNP.0.PS.D |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 1 (4) | 0.727 | 0.746 | 0.605 | 0.62 | 0.666 | 0.688 | 2.018 | 2.105 | 69.466 | 110.357 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 2 experiments | median | 0.66 | 0.649 | 0.601 | 0.591 | 0.566 | 0.56 |
| best | 0.696 | 0.693 | 0.618 | 0.613 | 0.575 | 0.573 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | CREB-related {1.1.7} (TFClass) |
| TF subfamily | CREB3-like {1.1.7.2} (TFClass) |
| TFClass ID | TFClass: 1.1.7.2.3 |
| HGNC | HGNC:23720 |
| MGI | MGI:2442695 |
| EntrezGene (human) | GeneID:64764 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:208647 (SSTAR profile) |
| UniProt ID (human) | CR3L2_HUMAN |
| UniProt ID (mouse) | CR3L2_MOUSE |
| UniProt AC (human) | Q70SY1 (TFClass) |
| UniProt AC (mouse) | Q8BH52 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 1 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | CR3L2.H14RSNP.0.PS.D.pcm |
| PWM | CR3L2.H14RSNP.0.PS.D.pwm |
| PFM | CR3L2.H14RSNP.0.PS.D.pfm |
| Threshold to P-value map | CR3L2.H14RSNP.0.PS.D.thr |
| Motif in other formats | |
| JASPAR format | CR3L2.H14RSNP.0.PS.D_jaspar_format.txt |
| MEME format | CR3L2.H14RSNP.0.PS.D_meme_format.meme |
| Transfac format | CR3L2.H14RSNP.0.PS.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 560.25 | 695.25 | 577.25 | 517.25 |
| 02 | 521.0 | 544.0 | 394.0 | 891.0 |
| 03 | 163.0 | 831.0 | 654.0 | 702.0 |
| 04 | 1871.0 | 110.0 | 112.0 | 257.0 |
| 05 | 1.0 | 2238.0 | 107.0 | 4.0 |
| 06 | 0.0 | 0.0 | 2350.0 | 0.0 |
| 07 | 0.0 | 4.0 | 10.0 | 2336.0 |
| 08 | 28.0 | 4.0 | 2315.0 | 3.0 |
| 09 | 97.0 | 115.0 | 1752.0 | 386.0 |
| 10 | 379.25 | 986.25 | 487.25 | 497.25 |
| 11 | 938.5 | 455.5 | 537.5 | 418.5 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.238 | 0.296 | 0.246 | 0.22 |
| 02 | 0.222 | 0.231 | 0.168 | 0.379 |
| 03 | 0.069 | 0.354 | 0.278 | 0.299 |
| 04 | 0.796 | 0.047 | 0.048 | 0.109 |
| 05 | 0.0 | 0.952 | 0.046 | 0.002 |
| 06 | 0.0 | 0.0 | 1.0 | 0.0 |
| 07 | 0.0 | 0.002 | 0.004 | 0.994 |
| 08 | 0.012 | 0.002 | 0.985 | 0.001 |
| 09 | 0.041 | 0.049 | 0.746 | 0.164 |
| 10 | 0.161 | 0.42 | 0.207 | 0.212 |
| 11 | 0.399 | 0.194 | 0.229 | 0.178 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.047 | 0.168 | -0.018 | -0.127 |
| 02 | -0.12 | -0.077 | -0.398 | 0.415 |
| 03 | -1.274 | 0.346 | 0.107 | 0.178 |
| 04 | 1.156 | -1.661 | -1.643 | -0.823 |
| 05 | -5.301 | 1.335 | -1.688 | -4.597 |
| 06 | -5.716 | -5.716 | 1.384 | -5.716 |
| 07 | -5.716 | -4.597 | -3.899 | 1.378 |
| 08 | -2.98 | -4.597 | 1.369 | -4.782 |
| 09 | -1.785 | -1.618 | 1.09 | -0.418 |
| 10 | -0.436 | 0.517 | -0.186 | -0.166 |
| 11 | 0.467 | -0.254 | -0.089 | -0.338 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.054575 |
| 0.0005 | 5.857085 |
| 0.0001 | 7.671055 |