Histone-lysine N-methyltransferase PRDM9 (PR domain zinc finger protein 9) (PR domain-containing protein 9) (Protein-lysine N-methyltransferase PRDM9) (EC 2.1.1.-) ([histone H3]-lysine36 N-trimethyltransferase PRDM9) (EC 2.1.1.359) ([histone H3]-lysine4 N-trimethyltransferase PRDM9) (EC 2.1.1.354) ([histone H3]-lysine9 N-trimethyltransferase PRDM9) (EC 2.1.1.355) ([histone H4]-N-methyl-L-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.362) ([histone H4]-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.361)

Histone-lysine N-methyltransferase PRDM9 (Hybrid sterility protein 1) (Meiosis-induced factor containing a PR/SET domain and zinc-finger motif) (PR domain zinc finger protein 9) (PR domain-containing protein 9) (Protein-lysine N-methyltransferase PRDM9) (EC 2.1.1.-) ([histone H3]-lysine36 N-trimethyltransferase PRDM9) (EC 2.1.1.359) ([histone H3]-lysine4 N-trimethyltransferase PRDM9) (EC 2.1.1.354) ([histone H3]-lysine9 N-trimethyltransferase PRDM9) (EC 2.1.1.355) ([histone H4]-N-methyl-L-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.362) ([histone H4]-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.361)


Progesterone receptor (PR) (Nuclear receptor subfamily 3 group C member 3)


RB-associated KRAB zinc finger protein (RB-associated KRAB repressor) (hRBaK) (Zinc finger protein 769)

RB-associated KRAB zinc finger protein (RB-associated KRAB repressor) (Zinc finger protein 769)


RE1-silencing transcription factor (Neural-restrictive silencer factor) (X2 box repressor)


DNA-binding protein RFX6 (Regulatory factor X 6) (Regulatory factor X domain-containing protein 1)


Nuclear receptor ROR-alpha (Nuclear receptor RZR-alpha) (Nuclear receptor subfamily 1 group F member 1) (RAR-related orphan receptor A) (Retinoid-related orphan receptor-alpha)


Runt-related transcription factor 1 (Acute myeloid leukemia 1 protein) (Core-binding factor subunit alpha-2) (CBF-alpha-2) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEA2-alpha B) (PEBP2-alpha B) (SL3-3 enhancer factor 1 alpha B subunit) (SL3/AKV core-binding factor alpha B subunit)


Sal-like protein 1 (Spalt-like transcription factor 1) (Zinc finger protein 794) (Zinc finger protein SALL1) (Zinc finger protein Spalt-1) (HSal1) (Sal-1)

Sal-like protein 1 (Zinc finger protein Spalt-3) (Sal-3) (mSal-3)


Sal-like protein 4 (Zinc finger protein 797) (Zinc finger protein SALL4)

Sal-like protein 4 (Zinc finger protein SALL4)


DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)


beta-Hairpin exposed by an alpha/beta-scaffold

Mothers against decapentaplegic homolog 2 (MAD homolog 2) (Mothers against DPP homolog 2) (JV18-1) (Mad-related protein 2) (hMAD-2) (SMAD family member 2) (SMAD 2) (Smad2) (hSMAD2)

Mothers against decapentaplegic homolog 2 (MAD homolog 2) (Mothers against DPP homolog 2) (Mad-related protein 2) (mMad2) (SMAD family member 2) (SMAD 2) (Smad2)


Mothers against decapentaplegic homolog 4 (MAD homolog 4) (Mothers against DPP homolog 4) (Deletion target in pancreatic carcinoma 4) (SMAD family member 4) (SMAD 4) (Smad4) (hSMAD4)

Mothers against decapentaplegic homolog 4 (MAD homolog 4) (Mothers against DPP homolog 4) (Deletion target in pancreatic carcinoma 4 homolog) (SMAD family member 4) (SMAD 4) (Smad4)


Other all-alpha-helical DNA-binding domains

High-mobility group (HMG) domain factors

Transcription factor SOX-13 (Islet cell antigen 12) (SRY (Sex determining region Y)-box 13) (Type 1 diabetes autoantigen ICA12)

Transcription factor SOX-13 (SRY (Sex determining region Y)-box 13) (mSox13)


Protein SOX-15 (Protein SOX-12) (Protein SOX-20)


Transcription factor Sp7 (Zinc finger protein osterix)

Transcription factor Sp7 (C22) (Zinc finger protein osterix)


Signal transducer and activator of transcription 5A (Mammary gland factor)


Signal transducer and activator of transcription 5B


Signal transducer and activator of transcription 1-alpha/beta (Transcription factor ISGF-3 components p91/p84)


Signal transducer and activator of transcription 2 (p113)


Signal transducer and activator of transcription 3 (Acute-phase response factor)


Signal transducer and activator of transcription 4


Signal transducer and activator of transcription 6 (IL-4 Stat)

Signal transducer and transcription activator 6


Recombining binding protein suppressor of hairless (CBF-1) (J kappa-recombination signal-binding protein) (RBP-J kappa) (RBP-J) (RBP-JK) (Renal carcinoma antigen NY-REN-30)

Recombining binding protein suppressor of hairless (J kappa-recombination signal-binding protein) (RBP-J kappa)


Transcription initiation factor TFIID subunit 1 (EC 2.3.1.48) (EC 2.7.11.1) (Cell cycle gene 1 protein) (TBP-associated factor 250 kDa) (p250) (Transcription initiation factor TFIID 250 kDa subunit) (TAF (II)250) (TAFII-250) (TAFII250)


T-cell acute lymphocytic leukemia protein 1 (TAL-1) (Class A basic helix-loop-helix protein 17) (bHLHa17) (Stem cell protein) (T-cell leukemia/lymphoma protein 5)

T-cell acute lymphocytic leukemia protein 1 homolog (TAL-1) (Stem cell protein)


TATA-box-binding protein (TATA sequence-binding protein) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)


Transcription factor p65 (Nuclear factor NF-kappa-B p65 subunit) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3)


Transcription factor 7-like 2 (HMG box transcription factor 4) (T-cell-specific transcription factor 4) (T-cell factor 4) (TCF-4) (hTCF-4)

Transcription factor 7-like 2 (HMG box transcription factor 4) (T-cell-specific transcription factor 4) (T-cell factor 4) (TCF-4) (mTCF-4)


Transcription factor Dp-1 (DRTF1-polypeptide 1) (DRTF1) (E2F dimerization partner 1)

Transcription factor Dp-1 (DRTF1-polypeptide 1) (E2F dimerization partner 1)


Zinc finger transcription factor Trps1 (Tricho-rhino-phalangeal syndrome type I protein) (Zinc finger protein GC79)


Twist-related protein 1 (Class A basic helix-loop-helix protein 38) (bHLHa38) (H-twist)


Twist-related protein 2 (Class A basic helix-loop-helix protein 39) (bHLHa39) (Dermis-expressed protein 1) (Dermo-1)

Twist-related protein 2 (Dermis-expressed protein 1) (Dermo-1)


Telomere zinc finger-associated protein (TZAP) (Krueppel-related zinc finger protein 3) (hKR3) (Zinc finger and BTB domain-containing protein 48) (Zinc finger protein 855)

Telomere zinc finger-associated protein (TZAP) (Krueppel-related zinc finger protein 3 homolog) (Zinc finger and BTB domain-containing protein 48)


Zinc finger protein 354A (Transcription factor 17) (TCF-17) (Zinc finger protein eZNF)

Zinc finger protein 354A (Kidney, ischemia, and developmentally-regulated protein 1) (Renal transcription factor Kid-1) (Transcription factor 17) (TCF-17)


Zinc finger and BTB domain-containing protein 17 (Myc-interacting zinc finger protein 1) (Miz-1) (Zinc finger protein 151) (Zinc finger protein 60)

Zinc finger and BTB domain-containing protein 17 (LP-1) (Polyomavirus late initiator promoter-binding protein) (Zinc finger protein 100) (Zfp-100) (Zinc finger protein 151) (Zinc finger protein Z13)


Zinc finger and BTB domain-containing protein 42 (Protein simiRP58)


Zinc finger and BTB domain-containing protein 44 (BTB/POZ domain-containing protein 15) (Zinc finger protein 851)


Zinc finger and BTB domain-containing protein 49 (Zinc finger protein 509)


Zinc finger and BTB domain-containing protein 6 (Zinc finger protein 482) (Zinc finger protein with interaction domain)


Zinc finger E-box-binding homeobox 1 (NIL-2-A zinc finger protein) (Negative regulator of IL2) (Transcription factor 8) (TCF-8)

Zinc finger E-box-binding homeobox 1 (Delta EF1) (Transcription factor 8) (TCF-8) (Zinc finger homeobox protein 1a) (MEB1)


Zinc finger E-box-binding homeobox 2 (Smad-interacting protein 1) (SMADIP1) (Zinc finger homeobox protein 1b)

Zinc finger E-box-binding homeobox 2 (Smad-interacting protein 1) (Zinc finger homeobox protein 1b)


Zinc finger protein 14 homolog (Zfp-14) (Zinc finger protein 531)

Zinc finger protein 14 (Zfp-14) (Zinc finger protein Krox-9)


Zinc finger protein 28 homolog (Zfp-28) (Krueppel-like zinc finger factor X6)

Zinc finger protein 28 (Zfp-28) (Protein mKR5)


Zinc finger protein 3 homolog (Zfp-3) (Zinc finger protein 752)


Zinc finger protein 37 (Zfp-37) (Male germ cell-specific zinc finger protein)


Zinc finger protein 57 homolog (Zfp-57) (Zinc finger protein 698)


Zinc finger protein 64 (Zfp-64) (Zinc finger protein 338)


Zinc finger protein 69 homolog (Zinc finger protein 642)

Zinc finger protein 69 (Zinc finger protein 642)


Zinc finger protein 82 homolog (Zfp-82) (Zinc finger protein 545)

Zinc finger protein 82 (Zfp-82) (Zinc finger protein 545)


Zinc finger protein 90 homolog (Zfp-90) (Zinc finger protein 756)

Zinc finger protein 90 (Zfp-90) (Zinc finger protein NK10)


Zinc finger protein ZIC 2 (Zinc finger protein of the cerebellum 2)


Zinc finger protein interacting with ribonucleoprotein K (Zinc finger protein 762)


Zinc finger protein with KRAB and SCAN domains 1 (Zinc finger protein 139) (Zinc finger protein 36) (Zinc finger protein KOX18)


Zinc finger protein with KRAB and SCAN domains 5 (Zinc finger protein 95 homolog) (Zfp-95)

Zinc finger protein with KRAB and SCAN domains 5 (Zinc finger protein 95) (Zfp-95)


Zinc finger protein 112 (Zfp-112) (Zinc finger protein 228)


Zinc finger protein 143 (SPH-binding factor) (Selenocysteine tRNA gene transcription-activating factor) (hStaf)

Zinc finger protein 143 (Zfp-143) (Selenocysteine tRNA gene transcription-activating factor) (mStaf)


Zinc finger protein 148 (Transcription factor ZBP-89) (Zinc finger DNA-binding protein 89)

Zinc finger protein 148 (Beta enolase repressor factor 1) (G-rich box-binding protein) (Transcription factor BFCOL1) (Transcription factor ZBP-89) (Zinc finger DNA-binding protein 89)


Zinc finger protein 13 (Zfp-13) (Zinc finger protein Krox-8)

Zinc finger protein 205 (Zinc finger protein 210)


Zinc finger protein 239 (Zinc finger protein HOK-2) (Zinc finger protein MOK-2)

Zinc finger protein 239 (Zfp-239) (Zinc finger protein MOK-2)


Zinc finger protein 322 (Zinc finger protein 322A) (Zinc finger protein 388) (Zinc finger protein 489)


Zinc finger protein 382 (KRAB/zinc finger suppressor protein 1) (KS1) (Multiple zinc finger and krueppel-associated box protein KS1)


Zinc finger protein 394 (Zinc finger protein with KRAB and SCAN domains 14)

Zinc finger protein 394 (Zinc finger protein 94) (Zfp-94) (Zinc finger protein with KRAB and SCAN domains 14)


Zinc finger protein 423 (Olf1/EBF-associated zinc finger protein) (hOAZ) (Smad- and Olf-interacting zinc finger protein)

Zinc finger protein 423 (Early B-cell factor-associated zinc finger protein) (Olf1/EBF-associated zinc finger protein) (Smad- and Olf-interacting zinc finger protein)


Zinc finger protein 431 (Zinc finger protein 932)


Zinc finger protein 436 (Zinc finger protein 46) (Zfp-46) (Zinc finger protein MLZ-4)


Zinc finger protein 467 (Endothelial cell-derived zinc finger protein) (EZI)


Zinc finger protein 664 (Zinc finger protein 176) (Zinc finger protein from organ of Corti)


Zinc finger protein 667 (Myocardial ischemic preconditioning up-regulated protein 1)


Zinc finger protein 692 (AICAR responsive element binding protein)


Zinc finger protein 711 (Zinc finger protein 6)


Zinc finger protein 18 (Heart development-specific gene 1 protein) (Zinc finger protein 535) (Zinc finger protein KOX11) (Zinc finger protein with KRAB and SCAN domains 6)

Zinc finger protein 18 (Zinc finger protein 535) (Zinc finger protein with KRAB and SCAN domains 6)


Zinc finger protein 24 (Retinoic acid suppression protein A) (RSG-A) (Zinc finger and SCAN domain-containing protein 3) (Zinc finger protein 191) (Zinc finger protein KOX17)

Zinc finger protein 24 (Hypomyelinated CNS protein) (Zinc finger protein 191) (Zinc finger protein ZF-12)


Zinc finger protein 8 (Zinc finger protein HF.18)

Zinc finger protein 8 (Zinc finger protein 128)


Zinc finger and SCAN domain-containing protein 21 (Renal carcinoma antigen NY-REN-21) (Zinc finger protein 38 homolog) (Zfp-38)

Zinc finger and SCAN domain-containing protein 21 (CtFIN51) (Transcription factor RU49) (Zinc finger protein 38) (Zfp-38)